Cluster: HRGMv2_2615_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2615
- CGC Family ID: CGCFAM_01524
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2615_73 | HRGMv2_2615_73_3 | 3939 | 4955 | - | GH179 |
| TF | HRGMv2_2615_73 | HRGMv2_2615_73_4 | 5107 | 5778 | + | Trans_reg_C |
| STP | HRGMv2_2615_73 | HRGMv2_2615_73_5 | 5806 | 6795 | + | HATPase_c |
| TC | HRGMv2_2615_73 | HRGMv2_2615_73_6 | 6906 | 7673 | + | 3.A.1.134.4 |
| TC | HRGMv2_2615_73 | HRGMv2_2615_73_7 | 7666 | 9630 | + | 3.A.1.134.4 |
| TC | HRGMv2_2615_73 | HRGMv2_2615_73_8 | 9678 | 10694 | - | 2.A.98.1.4 |
Gene ID: HRGMv2_2615_73_3
Type: CAZyme
Location: 3939 - 4955 (-)
Type: CAZyme
Location: 3939 - 4955 (-)
Gene ID: HRGMv2_2615_73_4
Type: TF
Location: 5107 - 5778 (+)
Type: TF
Location: 5107 - 5778 (+)
Gene ID: HRGMv2_2615_73_5
Type: STP
Location: 5806 - 6795 (+)
Type: STP
Location: 5806 - 6795 (+)
Gene ID: HRGMv2_2615_73_6
Type: TC
Location: 6906 - 7673 (+)
Type: TC
Location: 6906 - 7673 (+)
Gene ID: HRGMv2_2615_73_7
Type: TC
Location: 7666 - 9630 (+)
Type: TC
Location: 7666 - 9630 (+)
Gene ID: HRGMv2_2615_73_8
Type: TC
Location: 9678 - 10694 (-)
Type: TC
Location: 9678 - 10694 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.