Cluster: HRGMv2_2615_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2615
- CGC Family ID: CGCFAM_00060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2615_4 | HRGMv2_2615_4_29 | 33661 | 34464 | + | CE4 |
| TC | HRGMv2_2615_4 | HRGMv2_2615_4_30 | 34662 | 36239 | + | 3.A.1.1.10 |
| TC | HRGMv2_2615_4 | HRGMv2_2615_4_31 | 36393 | 37955 | + | 3.A.1.1.10 |
| pfam | HRGMv2_2615_4 | HRGMv2_2615_4_32 | 38129 | 39142 | - | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_2615_4 | HRGMv2_2615_4_33 | 39325 | 40872 | - | CBM32 |
Gene ID: HRGMv2_2615_4_29
Type: CAZyme
Location: 33661 - 34464 (+)
Type: CAZyme
Location: 33661 - 34464 (+)
Gene ID: HRGMv2_2615_4_30
Type: TC
Location: 34662 - 36239 (+)
Type: TC
Location: 34662 - 36239 (+)
Gene ID: HRGMv2_2615_4_31
Type: TC
Location: 36393 - 37955 (+)
Type: TC
Location: 36393 - 37955 (+)
Gene ID: HRGMv2_2615_4_32
Type: pfam
Location: 38129 - 39142 (-)
Type: pfam
Location: 38129 - 39142 (-)
Gene ID: HRGMv2_2615_4_33
Type: CAZyme
Location: 39325 - 40872 (-)
Type: CAZyme
Location: 39325 - 40872 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.