Cluster: HRGMv2_2615_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2615
- CGC Family ID: CGCFAM_00234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2615_65 | HRGMv2_2615_65_5 | 2280 | 2981 | - | 9.B.149.1.11 |
| NULL(UNKNOWN) | HRGMv2_2615_65 | HRGMv2_2615_65_6 | 3259 | 3447 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2615_65 | HRGMv2_2615_65_7 | 3511 | 6147 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| TC | HRGMv2_2615_65 | HRGMv2_2615_65_8 | 6197 | 7600 | + | 2.A.37.2.2 |
| CAZyme | HRGMv2_2615_65 | HRGMv2_2615_65_9 | 7662 | 8771 | - | GH88 |
| CAZyme | HRGMv2_2615_65 | HRGMv2_2615_65_10 | 8836 | 10476 | - | GH88 |
Gene ID: HRGMv2_2615_65_5
Type: TC
Location: 2280 - 2981 (-)
Type: TC
Location: 2280 - 2981 (-)
Gene ID: HRGMv2_2615_65_6
Type:
Location: 3259 - 3447 (+)
Type:
Location: 3259 - 3447 (+)
Gene ID: HRGMv2_2615_65_7
Type: pfam
Location: 3511 - 6147 (+)
Type: pfam
Location: 3511 - 6147 (+)
Gene ID: HRGMv2_2615_65_8
Type: TC
Location: 6197 - 7600 (+)
Type: TC
Location: 6197 - 7600 (+)
Gene ID: HRGMv2_2615_65_9
Type: CAZyme
Location: 7662 - 8771 (-)
Type: CAZyme
Location: 7662 - 8771 (-)
Gene ID: HRGMv2_2615_65_10
Type: CAZyme
Location: 8836 - 10476 (-)
Type: CAZyme
Location: 8836 - 10476 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.