Cluster: HRGMv2_2615_CGC18
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2615
- CGC Family ID: CGCFAM_06140
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2615_46 | HRGMv2_2615_46_3 | 2391 | 2954 | + | 2.A.107.1.2 |
| CAZyme | HRGMv2_2615_46 | HRGMv2_2615_46_4 | 2989 | 3765 | - | CE4 |
| sulfatase | HRGMv2_2615_46 | HRGMv2_2615_46_5 | 3890 | 5092 | - | S1_14 |
| pfam | HRGMv2_2615_46 | HRGMv2_2615_46_6 | 5220 | 6110 | - | Radical_SAM | Fer4_12 |
| TC | HRGMv2_2615_46 | HRGMv2_2615_46_7 | 6278 | 7147 | + | 3.A.11.1.4 |
| pfam | HRGMv2_2615_46 | HRGMv2_2615_46_8 | 7150 | 7611 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_2615_46 | HRGMv2_2615_46_9 | 7693 | 9204 | - | 2.A.35.2.1 |
| pfam | HRGMv2_2615_46 | HRGMv2_2615_46_10 | 9285 | 9758 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | HRGMv2_2615_46 | HRGMv2_2615_46_11 | 9936 | 10517 | - | HAD |
| TC | HRGMv2_2615_46 | HRGMv2_2615_46_12 | 10771 | 12120 | - | 2.A.66.1.32 |
| TC | HRGMv2_2615_46 | HRGMv2_2615_46_13 | 12261 | 12794 | - | 2.A.88.1.9 |
Gene ID: HRGMv2_2615_46_3
Type: TC
Location: 2391 - 2954 (+)
Type: TC
Location: 2391 - 2954 (+)
Gene ID: HRGMv2_2615_46_4
Type: CAZyme
Location: 2989 - 3765 (-)
Type: CAZyme
Location: 2989 - 3765 (-)
Gene ID: HRGMv2_2615_46_5
Type: sulfatase
Location: 3890 - 5092 (-)
Type: sulfatase
Location: 3890 - 5092 (-)
Gene ID: HRGMv2_2615_46_6
Type: pfam
Location: 5220 - 6110 (-)
Type: pfam
Location: 5220 - 6110 (-)
Gene ID: HRGMv2_2615_46_7
Type: TC
Location: 6278 - 7147 (+)
Type: TC
Location: 6278 - 7147 (+)
Gene ID: HRGMv2_2615_46_8
Type: pfam
Location: 7150 - 7611 (-)
Type: pfam
Location: 7150 - 7611 (-)
Gene ID: HRGMv2_2615_46_9
Type: TC
Location: 7693 - 9204 (-)
Type: TC
Location: 7693 - 9204 (-)
Gene ID: HRGMv2_2615_46_10
Type: pfam
Location: 9285 - 9758 (-)
Type: pfam
Location: 9285 - 9758 (-)
Gene ID: HRGMv2_2615_46_11
Type: pfam
Location: 9936 - 10517 (-)
Type: pfam
Location: 9936 - 10517 (-)
Gene ID: HRGMv2_2615_46_12
Type: TC
Location: 10771 - 12120 (-)
Type: TC
Location: 10771 - 12120 (-)
Gene ID: HRGMv2_2615_46_13
Type: TC
Location: 12261 - 12794 (-)
Type: TC
Location: 12261 - 12794 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.