Cluster: HRGMv2_2615_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2615
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2615_45 | HRGMv2_2615_45_13 | 11740 | 14301 | - | 3.A.3.2.21 |
| TC | HRGMv2_2615_45 | HRGMv2_2615_45_14 | 14478 | 14828 | - | 9.B.124.1.3 |
| pfam | HRGMv2_2615_45 | HRGMv2_2615_45_15 | 15127 | 16116 | - | GFO_IDH_MocA |
| CAZyme | HRGMv2_2615_45 | HRGMv2_2615_45_16 | 16137 | 17051 | - | GT2 |
| pfam | HRGMv2_2615_45 | HRGMv2_2615_45_17 | 17311 | 18144 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_2615_45 | HRGMv2_2615_45_18 | 18180 | 19430 | + | CBM67 | GH78 |
Gene ID: HRGMv2_2615_45_13
Type: TC
Location: 11740 - 14301 (-)
Type: TC
Location: 11740 - 14301 (-)
Gene ID: HRGMv2_2615_45_14
Type: TC
Location: 14478 - 14828 (-)
Type: TC
Location: 14478 - 14828 (-)
Gene ID: HRGMv2_2615_45_15
Type: pfam
Location: 15127 - 16116 (-)
Type: pfam
Location: 15127 - 16116 (-)
Gene ID: HRGMv2_2615_45_16
Type: CAZyme
Location: 16137 - 17051 (-)
Type: CAZyme
Location: 16137 - 17051 (-)
Gene ID: HRGMv2_2615_45_17
Type: pfam
Location: 17311 - 18144 (+)
Type: pfam
Location: 17311 - 18144 (+)
Gene ID: HRGMv2_2615_45_18
Type: CAZyme
Location: 18180 - 19430 (+)
Type: CAZyme
Location: 18180 - 19430 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.