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Cluster: HRGMv2_2615_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2615_31 HRGMv2_2615_31_13 7653 8831 + PL22
TF HRGMv2_2615_31 HRGMv2_2615_31_14 8989 9891 - 0036286
pfam HRGMv2_2615_31 HRGMv2_2615_31_15 10361 11839 + SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C
TC HRGMv2_2615_31 HRGMv2_2615_31_16 12257 13045 - 2.A.5.5.2
TC HRGMv2_2615_31 HRGMv2_2615_31_17 13098 14669 - 3.A.1.1.10
TF HRGMv2_2615_31 HRGMv2_2615_31_18 14671 16947 - HTH_AraC
CAZyme HRGMv2_2615_31 HRGMv2_2615_31_19 17093 20818 - CE20
CAZyme HRGMv2_2615_31 HRGMv2_2615_31_20 21092 25207 + CE20
Gene ID: HRGMv2_2615_31_13
Type: CAZyme
Location: 7653 - 8831 (+)
Gene ID: HRGMv2_2615_31_14
Type: TF
Location: 8989 - 9891 (-)
Gene ID: HRGMv2_2615_31_15
Type: pfam
Location: 10361 - 11839 (+)
Gene ID: HRGMv2_2615_31_16
Type: TC
Location: 12257 - 13045 (-)
Gene ID: HRGMv2_2615_31_17
Type: TC
Location: 13098 - 14669 (-)
Gene ID: HRGMv2_2615_31_18
Type: TF
Location: 14671 - 16947 (-)
Gene ID: HRGMv2_2615_31_19
Type: CAZyme
Location: 17093 - 20818 (-)
Gene ID: HRGMv2_2615_31_20
Type: CAZyme
Location: 21092 - 25207 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UMGS1253
→
Genus
Aphodoplasma
→
Species
Aphodoplasma sp900550065

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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