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Cluster: HRGMv2_2606_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2606_1 HRGMv2_2606_1_107 125007 125984 - 8.A.5.1.3
CAZyme HRGMv2_2606_1 HRGMv2_2606_1_108 126213 129449 + GH2
pfam HRGMv2_2606_1 HRGMv2_2606_1_109 129650 130396 - AIRC
CAZyme HRGMv2_2606_1 HRGMv2_2606_1_110 130650 132206 + GH13_44
CAZyme HRGMv2_2606_1 HRGMv2_2606_1_111 132386 135196 + PL11
Gene ID: HRGMv2_2606_1_107
Type: TC
Location: 125007 - 125984 (-)
Gene ID: HRGMv2_2606_1_108
Type: CAZyme
Location: 126213 - 129449 (+)
Gene ID: HRGMv2_2606_1_109
Type: pfam
Location: 129650 - 130396 (-)
Gene ID: HRGMv2_2606_1_110
Type: CAZyme
Location: 130650 - 132206 (+)
Gene ID: HRGMv2_2606_1_111
Type: CAZyme
Location: 132386 - 135196 (+)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1381
Family
UBA1381

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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