Cluster: HRGMv2_2606_CGC41
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2606
- CGC Family ID: CGCFAM_10116
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2606_34 | HRGMv2_2606_34_2 | 823 | 2964 | - | GH105 |
| peptidase | HRGMv2_2606_34 | HRGMv2_2606_34_3 | 3205 | 4761 | + | C69.002 |
| TF | HRGMv2_2606_34 | HRGMv2_2606_34_4 | 4810 | 6267 | - | HTH_AraC |
| TC | HRGMv2_2606_34 | HRGMv2_2606_34_5 | 6291 | 7988 | - | 9.B.33.1.1 |
| TC | HRGMv2_2606_34 | HRGMv2_2606_34_6 | 8198 | 9247 | - | 3.A.1.2.9 |
| TC | HRGMv2_2606_34 | HRGMv2_2606_34_7 | 9297 | 10352 | - | 3.A.1.2.1 |
| TC | HRGMv2_2606_34 | HRGMv2_2606_34_8 | 10353 | 11357 | - | 3.A.1.2.9 |
| TC | HRGMv2_2606_34 | HRGMv2_2606_34_9 | 11369 | 12859 | - | 3.A.1.2.9 |
| NULL(UNKNOWN) | HRGMv2_2606_34 | HRGMv2_2606_34_10 | 13069 | 13869 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2606_34 | HRGMv2_2606_34_11 | 13863 | 14549 | - | 3.A.1.132.6 |
| TF | HRGMv2_2606_34 | HRGMv2_2606_34_12 | 14557 | 14937 | - | GntR |
| pfam | HRGMv2_2606_34 | HRGMv2_2606_34_13 | 15060 | 15683 | - | ABC2_membrane_5 |
| TC | HRGMv2_2606_34 | HRGMv2_2606_34_14 | 15680 | 16528 | - | 3.A.1.149.1 |
| TF | HRGMv2_2606_34 | HRGMv2_2606_34_15 | 16531 | 16905 | - | GntR |
| CAZyme | HRGMv2_2606_34 | HRGMv2_2606_34_16 | 17035 | 18288 | - | GT2 |
Gene ID: HRGMv2_2606_34_2
Type: CAZyme
Location: 823 - 2964 (-)
Type: CAZyme
Location: 823 - 2964 (-)
Gene ID: HRGMv2_2606_34_3
Type: peptidase
Location: 3205 - 4761 (+)
Type: peptidase
Location: 3205 - 4761 (+)
Gene ID: HRGMv2_2606_34_4
Type: TF
Location: 4810 - 6267 (-)
Type: TF
Location: 4810 - 6267 (-)
Gene ID: HRGMv2_2606_34_5
Type: TC
Location: 6291 - 7988 (-)
Type: TC
Location: 6291 - 7988 (-)
Gene ID: HRGMv2_2606_34_6
Type: TC
Location: 8198 - 9247 (-)
Type: TC
Location: 8198 - 9247 (-)
Gene ID: HRGMv2_2606_34_7
Type: TC
Location: 9297 - 10352 (-)
Type: TC
Location: 9297 - 10352 (-)
Gene ID: HRGMv2_2606_34_8
Type: TC
Location: 10353 - 11357 (-)
Type: TC
Location: 10353 - 11357 (-)
Gene ID: HRGMv2_2606_34_9
Type: TC
Location: 11369 - 12859 (-)
Type: TC
Location: 11369 - 12859 (-)
Gene ID: HRGMv2_2606_34_10
Type:
Location: 13069 - 13869 (-)
Type:
Location: 13069 - 13869 (-)
Gene ID: HRGMv2_2606_34_11
Type: TC
Location: 13863 - 14549 (-)
Type: TC
Location: 13863 - 14549 (-)
Gene ID: HRGMv2_2606_34_12
Type: TF
Location: 14557 - 14937 (-)
Type: TF
Location: 14557 - 14937 (-)
Gene ID: HRGMv2_2606_34_13
Type: pfam
Location: 15060 - 15683 (-)
Type: pfam
Location: 15060 - 15683 (-)
Gene ID: HRGMv2_2606_34_14
Type: TC
Location: 15680 - 16528 (-)
Type: TC
Location: 15680 - 16528 (-)
Gene ID: HRGMv2_2606_34_15
Type: TF
Location: 16531 - 16905 (-)
Type: TF
Location: 16531 - 16905 (-)
Gene ID: HRGMv2_2606_34_16
Type: CAZyme
Location: 17035 - 18288 (-)
Type: CAZyme
Location: 17035 - 18288 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Ornithomonoglobus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.