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Cluster: HRGMv2_2606_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2606_31 HRGMv2_2606_31_19 16781 21205 - CE20 | CE3
TC HRGMv2_2606_31 HRGMv2_2606_31_20 21735 22961 + 3.A.1.4.5
TC HRGMv2_2606_31 HRGMv2_2606_31_21 23055 23960 + 3.A.1.4.4
TC HRGMv2_2606_31 HRGMv2_2606_31_22 23974 25047 + 3.A.1.4.4
TC HRGMv2_2606_31 HRGMv2_2606_31_23 25049 25828 + 3.A.1.4.5
TC HRGMv2_2606_31 HRGMv2_2606_31_24 25815 26507 + 3.A.1.4.4
Gene ID: HRGMv2_2606_31_19
Type: CAZyme
Location: 16781 - 21205 (-)
Gene ID: HRGMv2_2606_31_20
Type: TC
Location: 21735 - 22961 (+)
Gene ID: HRGMv2_2606_31_21
Type: TC
Location: 23055 - 23960 (+)
Gene ID: HRGMv2_2606_31_22
Type: TC
Location: 23974 - 25047 (+)
Gene ID: HRGMv2_2606_31_23
Type: TC
Location: 25049 - 25828 (+)
Gene ID: HRGMv2_2606_31_24
Type: TC
Location: 25815 - 26507 (+)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1381
Family
UBA1381

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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