Cluster: HRGMv2_2606_CGC27
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2606
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2606_15 | HRGMv2_2606_15_13 | 31399 | 37809 | + | CE8 | GH95 |
| CAZyme | HRGMv2_2606_15 | HRGMv2_2606_15_14 | 38597 | 41872 | + | PL1_2 |
| CAZyme | HRGMv2_2606_15 | HRGMv2_2606_15_15 | 41884 | 44460 | + | PL1_2 |
| NULL(UNKNOWN) | HRGMv2_2606_15 | HRGMv2_2606_15_16 | 44583 | 44696 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2606_15 | HRGMv2_2606_15_17 | 44739 | 45755 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2606_15 | HRGMv2_2606_15_18 | 45854 | 46864 | + | 3.A.1.1.10 |
| TC | HRGMv2_2606_15 | HRGMv2_2606_15_19 | 46885 | 47787 | + | 3.A.1.1.10 |
| STP | HRGMv2_2606_15 | HRGMv2_2606_15_20 | 47810 | 49492 | + | SBP_bac_1 |
| CAZyme | HRGMv2_2606_15 | HRGMv2_2606_15_21 | 50055 | 55115 | + | PL1_2 |
| pfam | HRGMv2_2606_15 | HRGMv2_2606_15_22 | 55120 | 57837 | + | SLH |
| pfam | HRGMv2_2606_15 | HRGMv2_2606_15_23 | 57850 | 61602 | + | SLH | SLH | SLH | aBig_2 |
| CAZyme | HRGMv2_2606_15 | HRGMv2_2606_15_24 | 61631 | 62983 | + | GH28 |
| CAZyme | HRGMv2_2606_15 | HRGMv2_2606_15_25 | 63003 | 64547 | + | CBM91 | GH43_10 |
Gene ID: HRGMv2_2606_15_13
Type: CAZyme
Location: 31399 - 37809 (+)
Type: CAZyme
Location: 31399 - 37809 (+)
Gene ID: HRGMv2_2606_15_14
Type: CAZyme
Location: 38597 - 41872 (+)
Type: CAZyme
Location: 38597 - 41872 (+)
Gene ID: HRGMv2_2606_15_15
Type: CAZyme
Location: 41884 - 44460 (+)
Type: CAZyme
Location: 41884 - 44460 (+)
Gene ID: HRGMv2_2606_15_16
Type:
Location: 44583 - 44696 (+)
Type:
Location: 44583 - 44696 (+)
Gene ID: HRGMv2_2606_15_17
Type: TF
Location: 44739 - 45755 (-)
Type: TF
Location: 44739 - 45755 (-)
Gene ID: HRGMv2_2606_15_18
Type: TC
Location: 45854 - 46864 (+)
Type: TC
Location: 45854 - 46864 (+)
Gene ID: HRGMv2_2606_15_19
Type: TC
Location: 46885 - 47787 (+)
Type: TC
Location: 46885 - 47787 (+)
Gene ID: HRGMv2_2606_15_20
Type: STP
Location: 47810 - 49492 (+)
Type: STP
Location: 47810 - 49492 (+)
Gene ID: HRGMv2_2606_15_21
Type: CAZyme
Location: 50055 - 55115 (+)
Type: CAZyme
Location: 50055 - 55115 (+)
Gene ID: HRGMv2_2606_15_22
Type: pfam
Location: 55120 - 57837 (+)
Type: pfam
Location: 55120 - 57837 (+)
Gene ID: HRGMv2_2606_15_23
Type: pfam
Location: 57850 - 61602 (+)
Type: pfam
Location: 57850 - 61602 (+)
Gene ID: HRGMv2_2606_15_24
Type: CAZyme
Location: 61631 - 62983 (+)
Type: CAZyme
Location: 61631 - 62983 (+)
Gene ID: HRGMv2_2606_15_25
Type: CAZyme
Location: 63003 - 64547 (+)
Type: CAZyme
Location: 63003 - 64547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Ornithomonoglobus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.