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Cluster: HRGMv2_2605_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2605_6 HRGMv2_2605_6_6 2715 4856 - GH105
peptidase HRGMv2_2605_6 HRGMv2_2605_6_7 5097 6653 + C69.002
NULL(UNKNOWN) HRGMv2_2605_6 HRGMv2_2605_6_8 6745 7545 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2605_6 HRGMv2_2605_6_9 7539 8240 - 3.A.1.132.6
TF HRGMv2_2605_6 HRGMv2_2605_6_10 8233 8613 - GntR
pfam HRGMv2_2605_6 HRGMv2_2605_6_11 8737 9360 - ABC2_membrane_5
TC HRGMv2_2605_6 HRGMv2_2605_6_12 9357 10205 - 3.A.1.149.1
TF HRGMv2_2605_6 HRGMv2_2605_6_13 10208 10582 - GntR
CAZyme HRGMv2_2605_6 HRGMv2_2605_6_14 10784 12037 - GT2
Gene ID: HRGMv2_2605_6_6
Type: CAZyme
Location: 2715 - 4856 (-)
Gene ID: HRGMv2_2605_6_7
Type: peptidase
Location: 5097 - 6653 (+)
Gene ID: HRGMv2_2605_6_8
Type:
Location: 6745 - 7545 (-)
Gene ID: HRGMv2_2605_6_9
Type: TC
Location: 7539 - 8240 (-)
Gene ID: HRGMv2_2605_6_10
Type: TF
Location: 8233 - 8613 (-)
Gene ID: HRGMv2_2605_6_11
Type: pfam
Location: 8737 - 9360 (-)
Gene ID: HRGMv2_2605_6_12
Type: TC
Location: 9357 - 10205 (-)
Gene ID: HRGMv2_2605_6_13
Type: TF
Location: 10208 - 10582 (-)
Gene ID: HRGMv2_2605_6_14
Type: CAZyme
Location: 10784 - 12037 (-)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1381
Family
UBA1381

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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