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Cluster: HRGMv2_2605_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2605_2 HRGMv2_2605_2_13 15425 16522 + CE12
sulfatase HRGMv2_2605_2 HRGMv2_2605_2_14 16672 17328 + S1_27
STP HRGMv2_2605_2 HRGMv2_2605_2_15 17380 18411 + PfkB
TC HRGMv2_2605_2 HRGMv2_2605_2_16 18582 19694 + 9.B.160.1.10
Gene ID: HRGMv2_2605_2_13
Type: CAZyme
Location: 15425 - 16522 (+)
Gene ID: HRGMv2_2605_2_14
Type: sulfatase
Location: 16672 - 17328 (+)
Gene ID: HRGMv2_2605_2_15
Type: STP
Location: 17380 - 18411 (+)
Gene ID: HRGMv2_2605_2_16
Type: TC
Location: 18582 - 19694 (+)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1381
Family
UBA1381

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2605_2_15 vegetarian > vegan 1.35774 0.03372

🧭 Explore Read Mapping of CGC

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