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Cluster: HRGMv2_2598_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2598_14 HRGMv2_2598_14_9 5541 6314 + 3.A.1.34.1
pfam HRGMv2_2598_14 HRGMv2_2598_14_10 6511 10362 + Flg_new | Flg_new_2 | Flg_new_2 | Flg_new_2
NULL(UNKNOWN) HRGMv2_2598_14 HRGMv2_2598_14_11 10424 11728 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2598_14 HRGMv2_2598_14_12 11731 13020 + 2.A.45.1.1
CAZyme HRGMv2_2598_14 HRGMv2_2598_14_13 13036 14583 + GH3
pfam HRGMv2_2598_14 HRGMv2_2598_14_14 14596 15954 + LRR_5 | LRR_5
NULL(UNKNOWN) HRGMv2_2598_14 HRGMv2_2598_14_15 15997 16356 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2598_14 HRGMv2_2598_14_16 16486 17688 + 2.A.4.7.6
Gene ID: HRGMv2_2598_14_9
Type: TC
Location: 5541 - 6314 (+)
Gene ID: HRGMv2_2598_14_10
Type: pfam
Location: 6511 - 10362 (+)
Gene ID: HRGMv2_2598_14_11
Type:
Location: 10424 - 11728 (+)
Gene ID: HRGMv2_2598_14_12
Type: TC
Location: 11731 - 13020 (+)
Gene ID: HRGMv2_2598_14_13
Type: CAZyme
Location: 13036 - 14583 (+)
Gene ID: HRGMv2_2598_14_14
Type: pfam
Location: 14596 - 15954 (+)
Gene ID: HRGMv2_2598_14_15
Type:
Location: 15997 - 16356 (-)
Gene ID: HRGMv2_2598_14_16
Type: TC
Location: 16486 - 17688 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
ML615J-28
→
Family
CAG-313
→
Genus
UBA1737
→
Species
UBA1737 sp934098295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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