Cluster: HRGMv2_2598_CGC12
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2598
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2598_29 | HRGMv2_2598_29_13 | 12689 | 14521 | + | 3.A.1.111.2 |
| NULL(UNKNOWN) | HRGMv2_2598_29 | HRGMv2_2598_29_14 | 14508 | 15350 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2598_29 | HRGMv2_2598_29_15 | 15419 | 16375 | + | 3.A.1.111.2 |
| NULL(UNKNOWN) | HRGMv2_2598_29 | HRGMv2_2598_29_16 | 16471 | 17544 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2598_29 | HRGMv2_2598_29_17 | 17541 | 19076 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_2598_29 | HRGMv2_2598_29_18 | 19078 | 19485 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2598_29 | HRGMv2_2598_29_19 | 19461 | 20201 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2598_29 | HRGMv2_2598_29_20 | 20254 | 21039 | + | 3.A.7.19.1 |
| pfam | HRGMv2_2598_29 | HRGMv2_2598_29_21 | 21110 | 22102 | + | tRNA-synt_2 | AsnA |
| TC | HRGMv2_2598_29 | HRGMv2_2598_29_22 | 22126 | 23139 | + | 2.A.19.5.3 |
Gene ID: HRGMv2_2598_29_13
Type: TC
Location: 12689 - 14521 (+)
Type: TC
Location: 12689 - 14521 (+)
Gene ID: HRGMv2_2598_29_14
Type:
Location: 14508 - 15350 (+)
Type:
Location: 14508 - 15350 (+)
Gene ID: HRGMv2_2598_29_15
Type: TC
Location: 15419 - 16375 (+)
Type: TC
Location: 15419 - 16375 (+)
Gene ID: HRGMv2_2598_29_16
Type:
Location: 16471 - 17544 (+)
Type:
Location: 16471 - 17544 (+)
Gene ID: HRGMv2_2598_29_17
Type: CAZyme
Location: 17541 - 19076 (+)
Type: CAZyme
Location: 17541 - 19076 (+)
Gene ID: HRGMv2_2598_29_18
Type:
Location: 19078 - 19485 (+)
Type:
Location: 19078 - 19485 (+)
Gene ID: HRGMv2_2598_29_19
Type:
Location: 19461 - 20201 (+)
Type:
Location: 19461 - 20201 (+)
Gene ID: HRGMv2_2598_29_20
Type: TC
Location: 20254 - 21039 (+)
Type: TC
Location: 20254 - 21039 (+)
Gene ID: HRGMv2_2598_29_21
Type: pfam
Location: 21110 - 22102 (+)
Type: pfam
Location: 21110 - 22102 (+)
Gene ID: HRGMv2_2598_29_22
Type: TC
Location: 22126 - 23139 (+)
Type: TC
Location: 22126 - 23139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
UBA1737
Species
UBA1737 sp934098295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.