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Cluster: HRGMv2_2597_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2597_2 HRGMv2_2597_2_69 76276 78300 + GH13_14
TF HRGMv2_2597_2 HRGMv2_2597_2_70 78531 79541 + 0043758
pfam HRGMv2_2597_2 HRGMv2_2597_2_71 79551 80204 + GrpE
TC HRGMv2_2597_2 HRGMv2_2597_2_72 80238 82073 + 1.A.33.1.4
pfam HRGMv2_2597_2 HRGMv2_2597_2_73 82101 83216 + DnaJ | DnaJ_CXXCXGXG | DnaJ_C
TC HRGMv2_2597_2 HRGMv2_2597_2_74 83418 92438 + 1.C.39.4.6
pfam HRGMv2_2597_2 HRGMv2_2597_2_75 92531 93280 + Methyltrans_RNA | PUA_4
pfam HRGMv2_2597_2 HRGMv2_2597_2_76 93282 94586 + UPF0004 | Radical_SAM
TC HRGMv2_2597_2 HRGMv2_2597_2_77 94579 95916 + 3.A.18.1.1
Gene ID: HRGMv2_2597_2_69
Type: CAZyme
Location: 76276 - 78300 (+)
Gene ID: HRGMv2_2597_2_70
Type: TF
Location: 78531 - 79541 (+)
Gene ID: HRGMv2_2597_2_71
Type: pfam
Location: 79551 - 80204 (+)
Gene ID: HRGMv2_2597_2_72
Type: TC
Location: 80238 - 82073 (+)
Gene ID: HRGMv2_2597_2_73
Type: pfam
Location: 82101 - 83216 (+)
Gene ID: HRGMv2_2597_2_74
Type: TC
Location: 83418 - 92438 (+)
Gene ID: HRGMv2_2597_2_75
Type: pfam
Location: 92531 - 93280 (+)
Gene ID: HRGMv2_2597_2_76
Type: pfam
Location: 93282 - 94586 (+)
Gene ID: HRGMv2_2597_2_77
Type: TC
Location: 94579 - 95916 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
ML615J-28
→
Family
CAG-313
→
Genus
CAG-313
→
Species
CAG-313 sp900760745

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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