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Cluster: HRGMv2_2597_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2597_27 HRGMv2_2597_27_9 7882 8493 + 2.A.115.2.14
CAZyme HRGMv2_2597_27 HRGMv2_2597_27_10 8704 10551 + CBM48 | GH13_9
pfam HRGMv2_2597_27 HRGMv2_2597_27_11 10544 11755 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2597_27 HRGMv2_2597_27_12 11757 12872 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2597_27 HRGMv2_2597_27_13 12922 14385 + GT5
CAZyme HRGMv2_2597_27 HRGMv2_2597_27_14 14406 16052 + GT35
Gene ID: HRGMv2_2597_27_9
Type: TC
Location: 7882 - 8493 (+)
Gene ID: HRGMv2_2597_27_10
Type: CAZyme
Location: 8704 - 10551 (+)
Gene ID: HRGMv2_2597_27_11
Type: pfam
Location: 10544 - 11755 (+)
Gene ID: HRGMv2_2597_27_12
Type: pfam
Location: 11757 - 12872 (+)
Gene ID: HRGMv2_2597_27_13
Type: CAZyme
Location: 12922 - 14385 (+)
Gene ID: HRGMv2_2597_27_14
Type: CAZyme
Location: 14406 - 16052 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
ML615J-28
→
Family
CAG-313
→
Genus
CAG-313
→
Species
CAG-313 sp900760745

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2597_27_11 omnivore > vegan 3.45822 0.02517

🧭 Explore Read Mapping of CGC

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