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Cluster: HRGMv2_2597_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2597_23 HRGMv2_2597_23_2 1687 3492 + GH20
pfam HRGMv2_2597_23 HRGMv2_2597_23_3 3489 6977 + SBP_bac_8
TC HRGMv2_2597_23 HRGMv2_2597_23_4 6996 8480 + 3.A.1.1.34
TC HRGMv2_2597_23 HRGMv2_2597_23_5 8482 9507 + 3.A.1.1.39
pfam HRGMv2_2597_23 HRGMv2_2597_23_6 9517 12459 + Yip1
pfam HRGMv2_2597_23 HRGMv2_2597_23_7 12470 15643 + DUF5696
TC HRGMv2_2597_23 HRGMv2_2597_23_8 15659 16735 + 3.A.1.1.25
TC HRGMv2_2597_23 HRGMv2_2597_23_9 16719 17906 + 3.A.1.1.24
Gene ID: HRGMv2_2597_23_2
Type: CAZyme
Location: 1687 - 3492 (+)
Gene ID: HRGMv2_2597_23_3
Type: pfam
Location: 3489 - 6977 (+)
Gene ID: HRGMv2_2597_23_4
Type: TC
Location: 6996 - 8480 (+)
Gene ID: HRGMv2_2597_23_5
Type: TC
Location: 8482 - 9507 (+)
Gene ID: HRGMv2_2597_23_6
Type: pfam
Location: 9517 - 12459 (+)
Gene ID: HRGMv2_2597_23_7
Type: pfam
Location: 12470 - 15643 (+)
Gene ID: HRGMv2_2597_23_8
Type: TC
Location: 15659 - 16735 (+)
Gene ID: HRGMv2_2597_23_9
Type: TC
Location: 16719 - 17906 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
ML615J-28
→
Family
CAG-313
→
Genus
CAG-313
→
Species
CAG-313 sp900760745

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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