Cluster: HRGMv2_2596_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2596
- CGC Family ID: CGCFAM_06137
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2596_3 | HRGMv2_2596_3_22 | 17617 | 19701 | + | GH18 |
| pfam | HRGMv2_2596_3 | HRGMv2_2596_3_23 | 19835 | 21040 | + | Acyltransferase |
| pfam | HRGMv2_2596_3 | HRGMv2_2596_3_24 | 21018 | 22475 | + | Glt_symporter |
| TC | HRGMv2_2596_3 | HRGMv2_2596_3_25 | 22489 | 23166 | - | 2.A.122.1.4 |
| TC | HRGMv2_2596_3 | HRGMv2_2596_3_26 | 23159 | 23554 | - | 1.E.14.1.16 |
Gene ID: HRGMv2_2596_3_22
Type: CAZyme
Location: 17617 - 19701 (+)
Type: CAZyme
Location: 17617 - 19701 (+)
Gene ID: HRGMv2_2596_3_23
Type: pfam
Location: 19835 - 21040 (+)
Type: pfam
Location: 19835 - 21040 (+)
Gene ID: HRGMv2_2596_3_24
Type: pfam
Location: 21018 - 22475 (+)
Type: pfam
Location: 21018 - 22475 (+)
Gene ID: HRGMv2_2596_3_25
Type: TC
Location: 22489 - 23166 (-)
Type: TC
Location: 22489 - 23166 (-)
Gene ID: HRGMv2_2596_3_26
Type: TC
Location: 23159 - 23554 (-)
Type: TC
Location: 23159 - 23554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Species
CAG-313 sp900539265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.