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Cluster: HRGMv2_2596_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2596_2 HRGMv2_2596_2_139 140569 142377 + GH20
NULL(UNKNOWN) HRGMv2_2596_2 HRGMv2_2596_2_140 142371 145796 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2596_2 HRGMv2_2596_2_141 145814 146248 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2596_2 HRGMv2_2596_2_142 146327 147685 + 3.A.1.1.34
TC HRGMv2_2596_2 HRGMv2_2596_2_143 147687 148712 + 3.A.1.1.39
pfam HRGMv2_2596_2 HRGMv2_2596_2_144 148725 151757 + Yip1
pfam HRGMv2_2596_2 HRGMv2_2596_2_145 151770 154832 + DUF5696
TC HRGMv2_2596_2 HRGMv2_2596_2_146 154842 155921 + 3.A.1.1.25
TC HRGMv2_2596_2 HRGMv2_2596_2_147 155905 157089 + 3.A.1.1.24
Gene ID: HRGMv2_2596_2_139
Type: CAZyme
Location: 140569 - 142377 (+)
Gene ID: HRGMv2_2596_2_140
Type:
Location: 142371 - 145796 (+)
Gene ID: HRGMv2_2596_2_141
Type:
Location: 145814 - 146248 (+)
Gene ID: HRGMv2_2596_2_142
Type: TC
Location: 146327 - 147685 (+)
Gene ID: HRGMv2_2596_2_143
Type: TC
Location: 147687 - 148712 (+)
Gene ID: HRGMv2_2596_2_144
Type: pfam
Location: 148725 - 151757 (+)
Gene ID: HRGMv2_2596_2_145
Type: pfam
Location: 151770 - 154832 (+)
Gene ID: HRGMv2_2596_2_146
Type: TC
Location: 154842 - 155921 (+)
Gene ID: HRGMv2_2596_2_147
Type: TC
Location: 155905 - 157089 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
ML615J-28
→
Family
CAG-313
→
Genus
CAG-313
→
Species
CAG-313 sp900539265

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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