Cluster: HRGMv2_2596_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2596
- CGC Family ID: CGCFAM_04058
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2596_1 | HRGMv2_2596_1_141 | 183260 | 185614 | + | 3.A.7.16.1 |
| NULL(UNKNOWN) | HRGMv2_2596_1 | HRGMv2_2596_1_142 | 185786 | 185965 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2596_1 | HRGMv2_2596_1_143 | 186090 | 186938 | - | Zip |
| TC | HRGMv2_2596_1 | HRGMv2_2596_1_144 | 187146 | 188204 | + | 9.A.40.2.4 |
| TC | HRGMv2_2596_1 | HRGMv2_2596_1_145 | 188204 | 189478 | + | 9.A.40.2.2 |
| CAZyme | HRGMv2_2596_1 | HRGMv2_2596_1_146 | 189603 | 192512 | + | GH18 |
Gene ID: HRGMv2_2596_1_141
Type: TC
Location: 183260 - 185614 (+)
Type: TC
Location: 183260 - 185614 (+)
Gene ID: HRGMv2_2596_1_142
Type:
Location: 185786 - 185965 (+)
Type:
Location: 185786 - 185965 (+)
Gene ID: HRGMv2_2596_1_143
Type: pfam
Location: 186090 - 186938 (-)
Type: pfam
Location: 186090 - 186938 (-)
Gene ID: HRGMv2_2596_1_144
Type: TC
Location: 187146 - 188204 (+)
Type: TC
Location: 187146 - 188204 (+)
Gene ID: HRGMv2_2596_1_145
Type: TC
Location: 188204 - 189478 (+)
Type: TC
Location: 188204 - 189478 (+)
Gene ID: HRGMv2_2596_1_146
Type: CAZyme
Location: 189603 - 192512 (+)
Type: CAZyme
Location: 189603 - 192512 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Species
CAG-313 sp900539265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.