Cluster: HRGMv2_2589_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2589
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2589_22 | HRGMv2_2589_22_24 | 17924 | 19021 | + | 3.A.1.14.19 |
| pfam | HRGMv2_2589_22 | HRGMv2_2589_22_25 | 19039 | 20064 | + | Methyltransf_2 | Dimerisation | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| pfam | HRGMv2_2589_22 | HRGMv2_2589_22_26 | 20234 | 21046 | + | PfkB | Phos_pyr_kin |
| CAZyme | HRGMv2_2589_22 | HRGMv2_2589_22_27 | 21119 | 22264 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2589_22 | HRGMv2_2589_22_28 | 22248 | 22862 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2589_22 | HRGMv2_2589_22_29 | 22843 | 23913 | + | GT4 |
Gene ID: HRGMv2_2589_22_24
Type: TC
Location: 17924 - 19021 (+)
Type: TC
Location: 17924 - 19021 (+)
Gene ID: HRGMv2_2589_22_25
Type: pfam
Location: 19039 - 20064 (+)
Type: pfam
Location: 19039 - 20064 (+)
Gene ID: HRGMv2_2589_22_26
Type: pfam
Location: 20234 - 21046 (+)
Type: pfam
Location: 20234 - 21046 (+)
Gene ID: HRGMv2_2589_22_27
Type: CAZyme
Location: 21119 - 22264 (+)
Type: CAZyme
Location: 21119 - 22264 (+)
Gene ID: HRGMv2_2589_22_28
Type:
Location: 22248 - 22862 (+)
Type:
Location: 22248 - 22862 (+)
Gene ID: HRGMv2_2589_22_29
Type: CAZyme
Location: 22843 - 23913 (+)
Type: CAZyme
Location: 22843 - 23913 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Methanomassiliicoccales
Family
Methanomassiliicoccaceae
Genus
Methanomassiliicoccus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.