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Cluster: HRGMv2_2589_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2589_5 HRGMv2_2589_5_70 64869 65813 + 3.A.1.138.1
pfam HRGMv2_2589_5 HRGMv2_2589_5_71 65818 66612 + ABC2_membrane | ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4
pfam HRGMv2_2589_5 HRGMv2_2589_5_72 66683 67114 - MaoC_dehydratas | FAS1_DH_region
TC HRGMv2_2589_5 HRGMv2_2589_5_73 67158 68543 - 2.A.66.1.32
pfam HRGMv2_2589_5 HRGMv2_2589_5_74 68998 69876 + VCA0040-like
pfam HRGMv2_2589_5 HRGMv2_2589_5_75 69929 70324 + ACT_7
CAZyme HRGMv2_2589_5 HRGMv2_2589_5_76 70445 71875 + AA4
TC HRGMv2_2589_5 HRGMv2_2589_5_77 71876 72541 - 9.B.149.1.8
Gene ID: HRGMv2_2589_5_70
Type: TC
Location: 64869 - 65813 (+)
Gene ID: HRGMv2_2589_5_71
Type: pfam
Location: 65818 - 66612 (+)
Gene ID: HRGMv2_2589_5_72
Type: pfam
Location: 66683 - 67114 (-)
Gene ID: HRGMv2_2589_5_73
Type: TC
Location: 67158 - 68543 (-)
Gene ID: HRGMv2_2589_5_74
Type: pfam
Location: 68998 - 69876 (+)
Gene ID: HRGMv2_2589_5_75
Type: pfam
Location: 69929 - 70324 (+)
Gene ID: HRGMv2_2589_5_76
Type: CAZyme
Location: 70445 - 71875 (+)
Gene ID: HRGMv2_2589_5_77
Type: TC
Location: 71876 - 72541 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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