Cluster: HRGMv2_2587_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2587
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2587_1 | HRGMv2_2587_1_90 | 93849 | 94505 | + | 9.B.149.1.8 |
| NULL(UNKNOWN) | HRGMv2_2587_1 | HRGMv2_2587_1_91 | 94506 | 94649 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2587_1 | HRGMv2_2587_1_92 | 94769 | 97711 | - | DEAD | Helicase_C | ResIII | DUF3427 | PLDc_2 | SWI2_SNF2 |
| CAZyme | HRGMv2_2587_1 | HRGMv2_2587_1_93 | 98078 | 99514 | - | AA4 |
Gene ID: HRGMv2_2587_1_90
Type: TC
Location: 93849 - 94505 (+)
Type: TC
Location: 93849 - 94505 (+)
Gene ID: HRGMv2_2587_1_91
Type:
Location: 94506 - 94649 (-)
Type:
Location: 94506 - 94649 (-)
Gene ID: HRGMv2_2587_1_92
Type: pfam
Location: 94769 - 97711 (-)
Type: pfam
Location: 94769 - 97711 (-)
Gene ID: HRGMv2_2587_1_93
Type: CAZyme
Location: 98078 - 99514 (-)
Type: CAZyme
Location: 98078 - 99514 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Methanomassiliicoccales
Family
Methanomethylophilaceae
Genus
Methanarcanum
Species
Methanarcanum hacksteinii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.