Cluster: HRGMv2_2585_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_2585
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2585_8 | HRGMv2_2585_8_60 | 74798 | 75466 | + | 2.A.115.2.10 |
| NULL(UNKNOWN) | HRGMv2_2585_8 | HRGMv2_2585_8_61 | 75693 | 76325 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2585_8 | HRGMv2_2585_8_62 | 76674 | 79058 | - | DUF2206 |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_63 | 79119 | 80309 | - | GT4 |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_64 | 80332 | 81462 | - | GT4 |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_65 | 81765 | 82886 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2585_8 | HRGMv2_2585_8_66 | 82956 | 84983 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_67 | 85124 | 86260 | - | GT4 |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_68 | 86382 | 87065 | - | GT2 |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_69 | 87217 | 88401 | - | GT4 |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_70 | 88407 | 89537 | - | GT4 |
| CAZyme | HRGMv2_2585_8 | HRGMv2_2585_8_71 | 89624 | 90850 | - | GT4 |
Gene ID: HRGMv2_2585_8_60
Type: TC
Location: 74798 - 75466 (+)
Type: TC
Location: 74798 - 75466 (+)
Gene ID: HRGMv2_2585_8_61
Type:
Location: 75693 - 76325 (+)
Type:
Location: 75693 - 76325 (+)
Gene ID: HRGMv2_2585_8_62
Type: pfam
Location: 76674 - 79058 (-)
Type: pfam
Location: 76674 - 79058 (-)
Gene ID: HRGMv2_2585_8_63
Type: CAZyme
Location: 79119 - 80309 (-)
Type: CAZyme
Location: 79119 - 80309 (-)
Gene ID: HRGMv2_2585_8_64
Type: CAZyme
Location: 80332 - 81462 (-)
Type: CAZyme
Location: 80332 - 81462 (-)
Gene ID: HRGMv2_2585_8_65
Type: CAZyme
Location: 81765 - 82886 (+)
Type: CAZyme
Location: 81765 - 82886 (+)
Gene ID: HRGMv2_2585_8_66
Type:
Location: 82956 - 84983 (-)
Type:
Location: 82956 - 84983 (-)
Gene ID: HRGMv2_2585_8_67
Type: CAZyme
Location: 85124 - 86260 (-)
Type: CAZyme
Location: 85124 - 86260 (-)
Gene ID: HRGMv2_2585_8_68
Type: CAZyme
Location: 86382 - 87065 (-)
Type: CAZyme
Location: 86382 - 87065 (-)
Gene ID: HRGMv2_2585_8_69
Type: CAZyme
Location: 87217 - 88401 (-)
Type: CAZyme
Location: 87217 - 88401 (-)
Gene ID: HRGMv2_2585_8_70
Type: CAZyme
Location: 88407 - 89537 (-)
Type: CAZyme
Location: 88407 - 89537 (-)
Gene ID: HRGMv2_2585_8_71
Type: CAZyme
Location: 89624 - 90850 (-)
Type: CAZyme
Location: 89624 - 90850 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanosphaera
Species
Methanosphaera cuniculi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.