Cluster: HRGMv2_2585_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2585
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2585_6 | HRGMv2_2585_6_97 | 105690 | 106616 | + | 2.A.4.7.5 |
| CAZyme | HRGMv2_2585_6 | HRGMv2_2585_6_98 | 106883 | 112345 | + | GT116 | GT2 | GT2 |
| pfam | HRGMv2_2585_6 | HRGMv2_2585_6_99 | 112342 | 113715 | + | Glycos_transf_1 | Glyco_transf_4 |
| pfam | HRGMv2_2585_6 | HRGMv2_2585_6_100 | 113964 | 114266 | + | EMC6_arch |
| CAZyme | HRGMv2_2585_6 | HRGMv2_2585_6_101 | 114464 | 117841 | + | GT2 |
Gene ID: HRGMv2_2585_6_97
Type: TC
Location: 105690 - 106616 (+)
Type: TC
Location: 105690 - 106616 (+)
Gene ID: HRGMv2_2585_6_98
Type: CAZyme
Location: 106883 - 112345 (+)
Type: CAZyme
Location: 106883 - 112345 (+)
Gene ID: HRGMv2_2585_6_99
Type: pfam
Location: 112342 - 113715 (+)
Type: pfam
Location: 112342 - 113715 (+)
Gene ID: HRGMv2_2585_6_100
Type: pfam
Location: 113964 - 114266 (+)
Type: pfam
Location: 113964 - 114266 (+)
Gene ID: HRGMv2_2585_6_101
Type: CAZyme
Location: 114464 - 117841 (+)
Type: CAZyme
Location: 114464 - 117841 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanosphaera
Species
Methanosphaera cuniculi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.