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Cluster: HRGMv2_2585_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2585_1 HRGMv2_2585_1_24 35398 36498 - GT4
NULL(UNKNOWN) HRGMv2_2585_1 HRGMv2_2585_1_25 36781 37062 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2585_1 HRGMv2_2585_1_26 37251 38198 + GT2
CAZyme HRGMv2_2585_1 HRGMv2_2585_1_27 38343 39614 + GT4
CAZyme HRGMv2_2585_1 HRGMv2_2585_1_28 39604 40572 + GT2
TF HRGMv2_2585_1 HRGMv2_2585_1_29 41067 41507 + TrmB
TC HRGMv2_2585_1 HRGMv2_2585_1_30 41687 42913 + 1.A.26.1.2
TC HRGMv2_2585_1 HRGMv2_2585_1_31 42937 44211 + 2.A.55.3.6
Gene ID: HRGMv2_2585_1_24
Type: CAZyme
Location: 35398 - 36498 (-)
Gene ID: HRGMv2_2585_1_25
Type:
Location: 36781 - 37062 (+)
Gene ID: HRGMv2_2585_1_26
Type: CAZyme
Location: 37251 - 38198 (+)
Gene ID: HRGMv2_2585_1_27
Type: CAZyme
Location: 38343 - 39614 (+)
Gene ID: HRGMv2_2585_1_28
Type: CAZyme
Location: 39604 - 40572 (+)
Gene ID: HRGMv2_2585_1_29
Type: TF
Location: 41067 - 41507 (+)
Gene ID: HRGMv2_2585_1_30
Type: TC
Location: 41687 - 42913 (+)
Gene ID: HRGMv2_2585_1_31
Type: TC
Location: 42937 - 44211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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