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Cluster: HRGMv2_2584_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2584_4 HRGMv2_2584_4_40 36100 36780 + 3.A.1.23.8
TC HRGMv2_2584_4 HRGMv2_2584_4_41 36782 37069 + 3.A.1.23.8
pfam HRGMv2_2584_4 HRGMv2_2584_4_42 37159 37839 + CbiQ
TC HRGMv2_2584_4 HRGMv2_2584_4_43 37859 38689 + 3.A.1.23.2
NULL(UNKNOWN) HRGMv2_2584_4 HRGMv2_2584_4_44 38767 39621 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2584_4 HRGMv2_2584_4_45 39985 41835 + 3.A.3.6.16
pfam HRGMv2_2584_4 HRGMv2_2584_4_46 41937 42395 + DMRL_synthase
CAZyme HRGMv2_2584_4 HRGMv2_2584_4_47 42412 43131 + GT2
pfam HRGMv2_2584_4 HRGMv2_2584_4_48 43144 43494 + DUF2304
TC HRGMv2_2584_4 HRGMv2_2584_4_49 43590 44255 + 3.D.7.1.1
Gene ID: HRGMv2_2584_4_40
Type: TC
Location: 36100 - 36780 (+)
Gene ID: HRGMv2_2584_4_41
Type: TC
Location: 36782 - 37069 (+)
Gene ID: HRGMv2_2584_4_42
Type: pfam
Location: 37159 - 37839 (+)
Gene ID: HRGMv2_2584_4_43
Type: TC
Location: 37859 - 38689 (+)
Gene ID: HRGMv2_2584_4_44
Type:
Location: 38767 - 39621 (+)
Gene ID: HRGMv2_2584_4_45
Type: TC
Location: 39985 - 41835 (+)
Gene ID: HRGMv2_2584_4_46
Type: pfam
Location: 41937 - 42395 (+)
Gene ID: HRGMv2_2584_4_47
Type: CAZyme
Location: 42412 - 43131 (+)
Gene ID: HRGMv2_2584_4_48
Type: pfam
Location: 43144 - 43494 (+)
Gene ID: HRGMv2_2584_4_49
Type: TC
Location: 43590 - 44255 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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