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Cluster: HRGMv2_2580_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2580_4 HRGMv2_2580_4_23 29805 30890 - 3.D.6.1.2
TC HRGMv2_2580_4 HRGMv2_2580_4_24 30887 32218 - 3.D.6.1.2
sulfatase HRGMv2_2580_4 HRGMv2_2580_4_25 32582 34060 + S1_6
pfam HRGMv2_2580_4 HRGMv2_2580_4_26 34227 35141 + GIY-YIG
TC HRGMv2_2580_4 HRGMv2_2580_4_27 35250 37253 - 4.A.1.2.13
CAZyme HRGMv2_2580_4 HRGMv2_2580_4_28 37807 40485 + GH65
pfam HRGMv2_2580_4 HRGMv2_2580_4_29 40529 41179 + Hydrolase | HAD_2
TF HRGMv2_2580_4 HRGMv2_2580_4_30 41410 42126 + GntR
TC HRGMv2_2580_4 HRGMv2_2580_4_31 42198 44780 - 2.A.1.3.35
Gene ID: HRGMv2_2580_4_23
Type: TC
Location: 29805 - 30890 (-)
Gene ID: HRGMv2_2580_4_24
Type: TC
Location: 30887 - 32218 (-)
Gene ID: HRGMv2_2580_4_25
Type: sulfatase
Location: 32582 - 34060 (+)
Gene ID: HRGMv2_2580_4_26
Type: pfam
Location: 34227 - 35141 (+)
Gene ID: HRGMv2_2580_4_27
Type: TC
Location: 35250 - 37253 (-)
Gene ID: HRGMv2_2580_4_28
Type: CAZyme
Location: 37807 - 40485 (+)
Gene ID: HRGMv2_2580_4_29
Type: pfam
Location: 40529 - 41179 (+)
Gene ID: HRGMv2_2580_4_30
Type: TF
Location: 41410 - 42126 (+)
Gene ID: HRGMv2_2580_4_31
Type: TC
Location: 42198 - 44780 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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