Cluster: HRGMv2_2580_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2580
- CGC Family ID: CGCFAM_01789
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2580_3 | HRGMv2_2580_3_44 | 48144 | 49100 | - | 1.A.23.3.1 |
| TC | HRGMv2_2580_3 | HRGMv2_2580_3_45 | 49385 | 51124 | - | 2.A.58.2.2 |
| pfam | HRGMv2_2580_3 | HRGMv2_2580_3_46 | 51419 | 52174 | - | adh_short | adh_short_C2 |
| pfam | HRGMv2_2580_3 | HRGMv2_2580_3_47 | 52442 | 53209 | - | Pro_isomerase |
| CAZyme | HRGMv2_2580_3 | HRGMv2_2580_3_48 | 53546 | 54637 | + | GH170 |
Gene ID: HRGMv2_2580_3_44
Type: TC
Location: 48144 - 49100 (-)
Type: TC
Location: 48144 - 49100 (-)
Gene ID: HRGMv2_2580_3_45
Type: TC
Location: 49385 - 51124 (-)
Type: TC
Location: 49385 - 51124 (-)
Gene ID: HRGMv2_2580_3_46
Type: pfam
Location: 51419 - 52174 (-)
Type: pfam
Location: 51419 - 52174 (-)
Gene ID: HRGMv2_2580_3_47
Type: pfam
Location: 52442 - 53209 (-)
Type: pfam
Location: 52442 - 53209 (-)
Gene ID: HRGMv2_2580_3_48
Type: CAZyme
Location: 53546 - 54637 (+)
Type: CAZyme
Location: 53546 - 54637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.