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Cluster: HRGMv2_2580_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2580_2 HRGMv2_2580_2_73 76846 78201 + 2.A.2.3.3
TF HRGMv2_2580_2 HRGMv2_2580_2_74 78408 79307 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2580_2 HRGMv2_2580_2_75 79432 81438 + GH31_4
TC HRGMv2_2580_2 HRGMv2_2580_2_76 81537 83306 - 3.D.10.1.5
TC HRGMv2_2580_2 HRGMv2_2580_2_77 83439 85067 + 9.B.33.1.1
TF HRGMv2_2580_2 HRGMv2_2580_2_78 85042 85800 + HTH_AraC
CAZyme HRGMv2_2580_2 HRGMv2_2580_2_79 86012 88693 + GH146
CAZyme HRGMv2_2580_2 HRGMv2_2580_2_80 88755 90020 - GH27
Gene ID: HRGMv2_2580_2_73
Type: TC
Location: 76846 - 78201 (+)
Gene ID: HRGMv2_2580_2_74
Type: TF
Location: 78408 - 79307 (+)
Gene ID: HRGMv2_2580_2_75
Type: CAZyme
Location: 79432 - 81438 (+)
Gene ID: HRGMv2_2580_2_76
Type: TC
Location: 81537 - 83306 (-)
Gene ID: HRGMv2_2580_2_77
Type: TC
Location: 83439 - 85067 (+)
Gene ID: HRGMv2_2580_2_78
Type: TF
Location: 85042 - 85800 (+)
Gene ID: HRGMv2_2580_2_79
Type: CAZyme
Location: 86012 - 88693 (+)
Gene ID: HRGMv2_2580_2_80
Type: CAZyme
Location: 88755 - 90020 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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