Cluster: HRGMv2_2580_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2580
- CGC Family ID: CGCFAM_00037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2580_22 | HRGMv2_2580_22_26 | 28772 | 29641 | - | 3.A.1.1.27 |
| TC | HRGMv2_2580_22 | HRGMv2_2580_22_27 | 29645 | 30994 | - | 3.A.1.1.27 |
| TC | HRGMv2_2580_22 | HRGMv2_2580_22_28 | 31290 | 32561 | - | 3.A.1.1.27 |
| CAZyme | HRGMv2_2580_22 | HRGMv2_2580_22_29 | 33011 | 34774 | + | CBM34 | GH13_20 |
| CAZyme | HRGMv2_2580_22 | HRGMv2_2580_22_30 | 34860 | 36491 | + | GH13_31 |
| CAZyme | HRGMv2_2580_22 | HRGMv2_2580_22_31 | 36491 | 38155 | + | GH13_31 |
Gene ID: HRGMv2_2580_22_26
Type: TC
Location: 28772 - 29641 (-)
Type: TC
Location: 28772 - 29641 (-)
Gene ID: HRGMv2_2580_22_27
Type: TC
Location: 29645 - 30994 (-)
Type: TC
Location: 29645 - 30994 (-)
Gene ID: HRGMv2_2580_22_28
Type: TC
Location: 31290 - 32561 (-)
Type: TC
Location: 31290 - 32561 (-)
Gene ID: HRGMv2_2580_22_29
Type: CAZyme
Location: 33011 - 34774 (+)
Type: CAZyme
Location: 33011 - 34774 (+)
Gene ID: HRGMv2_2580_22_30
Type: CAZyme
Location: 34860 - 36491 (+)
Type: CAZyme
Location: 34860 - 36491 (+)
Gene ID: HRGMv2_2580_22_31
Type: CAZyme
Location: 36491 - 38155 (+)
Type: CAZyme
Location: 36491 - 38155 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.