Cluster: HRGMv2_2580_CGC33
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2580
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2580_22 | HRGMv2_2580_22_1 | 1 | 630 | + | 2.A.49.9.2 |
| TC | HRGMv2_2580_22 | HRGMv2_2580_22_2 | 770 | 2014 | - | 4.A.3.2.8 |
| TF | HRGMv2_2580_22 | HRGMv2_2580_22_3 | 2117 | 2926 | + | HTH_AraC |
| CAZyme | HRGMv2_2580_22 | HRGMv2_2580_22_4 | 3027 | 4481 | + | GH1 |
| CAZyme | HRGMv2_2580_22 | HRGMv2_2580_22_5 | 4481 | 6490 | + | GH42 |
| CAZyme | HRGMv2_2580_22 | HRGMv2_2580_22_6 | 6583 | 8868 | + | GH31_3 |
| pfam | HRGMv2_2580_22 | HRGMv2_2580_22_7 | 8980 | 10005 | - | Bac_luciferase |
| TC | HRGMv2_2580_22 | HRGMv2_2580_22_8 | 10347 | 11840 | + | 2.A.3.7.5 |
| NULL(UNKNOWN) | HRGMv2_2580_22 | HRGMv2_2580_22_9 | 12082 | 12819 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2580_22 | HRGMv2_2580_22_10 | 12983 | 13249 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2580_22 | HRGMv2_2580_22_11 | 13354 | 14100 | + | 1.A.78.2.2 |
| peptidase | HRGMv2_2580_22 | HRGMv2_2580_22_12 | 14269 | 14961 | + | S09.UPW |
| pfam | HRGMv2_2580_22 | HRGMv2_2580_22_13 | 15053 | 15799 | + | PseudoU_synth_1 | PseudoU_synth_1 |
| CAZyme | HRGMv2_2580_22 | HRGMv2_2580_22_14 | 15854 | 17845 | - | GH13_14 |
Gene ID: HRGMv2_2580_22_1
Type: TC
Location: 1 - 630 (+)
Type: TC
Location: 1 - 630 (+)
Gene ID: HRGMv2_2580_22_2
Type: TC
Location: 770 - 2014 (-)
Type: TC
Location: 770 - 2014 (-)
Gene ID: HRGMv2_2580_22_3
Type: TF
Location: 2117 - 2926 (+)
Type: TF
Location: 2117 - 2926 (+)
Gene ID: HRGMv2_2580_22_4
Type: CAZyme
Location: 3027 - 4481 (+)
Type: CAZyme
Location: 3027 - 4481 (+)
Gene ID: HRGMv2_2580_22_5
Type: CAZyme
Location: 4481 - 6490 (+)
Type: CAZyme
Location: 4481 - 6490 (+)
Gene ID: HRGMv2_2580_22_6
Type: CAZyme
Location: 6583 - 8868 (+)
Type: CAZyme
Location: 6583 - 8868 (+)
Gene ID: HRGMv2_2580_22_7
Type: pfam
Location: 8980 - 10005 (-)
Type: pfam
Location: 8980 - 10005 (-)
Gene ID: HRGMv2_2580_22_8
Type: TC
Location: 10347 - 11840 (+)
Type: TC
Location: 10347 - 11840 (+)
Gene ID: HRGMv2_2580_22_9
Type:
Location: 12082 - 12819 (+)
Type:
Location: 12082 - 12819 (+)
Gene ID: HRGMv2_2580_22_10
Type:
Location: 12983 - 13249 (+)
Type:
Location: 12983 - 13249 (+)
Gene ID: HRGMv2_2580_22_11
Type: TC
Location: 13354 - 14100 (+)
Type: TC
Location: 13354 - 14100 (+)
Gene ID: HRGMv2_2580_22_12
Type: peptidase
Location: 14269 - 14961 (+)
Type: peptidase
Location: 14269 - 14961 (+)
Gene ID: HRGMv2_2580_22_13
Type: pfam
Location: 15053 - 15799 (+)
Type: pfam
Location: 15053 - 15799 (+)
Gene ID: HRGMv2_2580_22_14
Type: CAZyme
Location: 15854 - 17845 (-)
Type: CAZyme
Location: 15854 - 17845 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.