Cluster: HRGMv2_2580_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2580
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2580_20 | HRGMv2_2580_20_16 | 18330 | 19538 | - | GH43_4 |
| CAZyme | HRGMv2_2580_20 | HRGMv2_2580_20_17 | 19640 | 20605 | - | GH43_26 |
| CAZyme | HRGMv2_2580_20 | HRGMv2_2580_20_18 | 20609 | 22033 | - | GH43_4 |
| pfam | HRGMv2_2580_20 | HRGMv2_2580_20_19 | 22026 | 22637 | - | DUF624 |
| TC | HRGMv2_2580_20 | HRGMv2_2580_20_20 | 22644 | 23480 | - | 3.A.1.1.36 |
| TC | HRGMv2_2580_20 | HRGMv2_2580_20_21 | 23494 | 24414 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_2580_20_16
Type: CAZyme
Location: 18330 - 19538 (-)
Type: CAZyme
Location: 18330 - 19538 (-)
Gene ID: HRGMv2_2580_20_17
Type: CAZyme
Location: 19640 - 20605 (-)
Type: CAZyme
Location: 19640 - 20605 (-)
Gene ID: HRGMv2_2580_20_18
Type: CAZyme
Location: 20609 - 22033 (-)
Type: CAZyme
Location: 20609 - 22033 (-)
Gene ID: HRGMv2_2580_20_19
Type: pfam
Location: 22026 - 22637 (-)
Type: pfam
Location: 22026 - 22637 (-)
Gene ID: HRGMv2_2580_20_20
Type: TC
Location: 22644 - 23480 (-)
Type: TC
Location: 22644 - 23480 (-)
Gene ID: HRGMv2_2580_20_21
Type: TC
Location: 23494 - 24414 (-)
Type: TC
Location: 23494 - 24414 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.