Cluster: HRGMv2_2580_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2580
- CGC Family ID: CGCFAM_00026
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2580_18 | HRGMv2_2580_18_40 | 53949 | 54581 | - | 9.B.28.1.2 |
| CAZyme | HRGMv2_2580_18 | HRGMv2_2580_18_41 | 54640 | 56478 | - | GH87 |
| STP | HRGMv2_2580_18 | HRGMv2_2580_18_42 | 56550 | 58133 | - | SBP_bac_1 |
| TC | HRGMv2_2580_18 | HRGMv2_2580_18_43 | 58167 | 59090 | - | 3.A.1.1.29 |
| TC | HRGMv2_2580_18 | HRGMv2_2580_18_44 | 59103 | 60050 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2580_18_40
Type: TC
Location: 53949 - 54581 (-)
Type: TC
Location: 53949 - 54581 (-)
Gene ID: HRGMv2_2580_18_41
Type: CAZyme
Location: 54640 - 56478 (-)
Type: CAZyme
Location: 54640 - 56478 (-)
Gene ID: HRGMv2_2580_18_42
Type: STP
Location: 56550 - 58133 (-)
Type: STP
Location: 56550 - 58133 (-)
Gene ID: HRGMv2_2580_18_43
Type: TC
Location: 58167 - 59090 (-)
Type: TC
Location: 58167 - 59090 (-)
Gene ID: HRGMv2_2580_18_44
Type: TC
Location: 59103 - 60050 (-)
Type: TC
Location: 59103 - 60050 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.