Cluster: HRGMv2_2580_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2580
- CGC Family ID: CGCFAM_02781
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2580_13 | HRGMv2_2580_13_61 | 61860 | 63623 | + | 3.A.1.135.5 |
| TC | HRGMv2_2580_13 | HRGMv2_2580_13_62 | 63620 | 65368 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2580_13 | HRGMv2_2580_13_63 | 66071 | 67462 | - | Zn_Ribbon_1 | Zn_ribbon_3 |
| CAZyme | HRGMv2_2580_13 | HRGMv2_2580_13_64 | 67605 | 68852 | - | GH3 |
| TC | HRGMv2_2580_13 | HRGMv2_2580_13_65 | 69372 | 69890 | - | 3.A.1.26.10 |
| TC | HRGMv2_2580_13 | HRGMv2_2580_13_66 | 70226 | 70834 | - | 2.A.88.5.2 |
Gene ID: HRGMv2_2580_13_61
Type: TC
Location: 61860 - 63623 (+)
Type: TC
Location: 61860 - 63623 (+)
Gene ID: HRGMv2_2580_13_62
Type: TC
Location: 63620 - 65368 (+)
Type: TC
Location: 63620 - 65368 (+)
Gene ID: HRGMv2_2580_13_63
Type: pfam
Location: 66071 - 67462 (-)
Type: pfam
Location: 66071 - 67462 (-)
Gene ID: HRGMv2_2580_13_64
Type: CAZyme
Location: 67605 - 68852 (-)
Type: CAZyme
Location: 67605 - 68852 (-)
Gene ID: HRGMv2_2580_13_65
Type: TC
Location: 69372 - 69890 (-)
Type: TC
Location: 69372 - 69890 (-)
Gene ID: HRGMv2_2580_13_66
Type: TC
Location: 70226 - 70834 (-)
Type: TC
Location: 70226 - 70834 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.