Cluster: HRGMv2_2580_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2580
- CGC Family ID: CGCFAM_03279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2580_2 | HRGMv2_2580_2_22 | 25426 | 26868 | + | GH1 |
| CAZyme | HRGMv2_2580_2 | HRGMv2_2580_2_23 | 26871 | 29027 | + | GH3 |
| TF | HRGMv2_2580_2 | HRGMv2_2580_2_24 | 29240 | 30250 | + | LacI |
| pfam | HRGMv2_2580_2 | HRGMv2_2580_2_25 | 30253 | 31182 | + | ROK |
| TC | HRGMv2_2580_2 | HRGMv2_2580_2_26 | 31339 | 32292 | + | 3.A.1.1.10 |
| TC | HRGMv2_2580_2 | HRGMv2_2580_2_27 | 32311 | 33186 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_2580_2_22
Type: CAZyme
Location: 25426 - 26868 (+)
Type: CAZyme
Location: 25426 - 26868 (+)
Gene ID: HRGMv2_2580_2_23
Type: CAZyme
Location: 26871 - 29027 (+)
Type: CAZyme
Location: 26871 - 29027 (+)
Gene ID: HRGMv2_2580_2_24
Type: TF
Location: 29240 - 30250 (+)
Type: TF
Location: 29240 - 30250 (+)
Gene ID: HRGMv2_2580_2_25
Type: pfam
Location: 30253 - 31182 (+)
Type: pfam
Location: 30253 - 31182 (+)
Gene ID: HRGMv2_2580_2_26
Type: TC
Location: 31339 - 32292 (+)
Type: TC
Location: 31339 - 32292 (+)
Gene ID: HRGMv2_2580_2_27
Type: TC
Location: 32311 - 33186 (+)
Type: TC
Location: 32311 - 33186 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.