Cluster: HRGMv2_2580_CGC18
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2580
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2580_8 | HRGMv2_2580_8_3 | 1431 | 3128 | + | 3.A.1.1.29 |
| TC | HRGMv2_2580_8 | HRGMv2_2580_8_4 | 3218 | 4183 | + | 3.A.1.1.29 |
| TC | HRGMv2_2580_8 | HRGMv2_2580_8_5 | 4202 | 5098 | + | 3.A.1.1.29 |
| pfam | HRGMv2_2580_8 | HRGMv2_2580_8_6 | 5137 | 5745 | + | DUF624 |
| CAZyme | HRGMv2_2580_8 | HRGMv2_2580_8_7 | 6012 | 8138 | + | GH3 |
| CAZyme | HRGMv2_2580_8 | HRGMv2_2580_8_8 | 8151 | 9251 | + | GH8 |
| pfam | HRGMv2_2580_8 | HRGMv2_2580_8_9 | 9346 | 10509 | + | Lipase_GDSL | Lipase_GDSL_2 |
| peptidase | HRGMv2_2580_8 | HRGMv2_2580_8_10 | 10531 | 11430 | + | S09.UPW |
| CAZyme | HRGMv2_2580_8 | HRGMv2_2580_8_11 | 11448 | 12986 | + | CBM91 | GH43_10 |
| TC | HRGMv2_2580_8 | HRGMv2_2580_8_12 | 13541 | 14875 | + | 4.A.3.2.9 |
| CAZyme | HRGMv2_2580_8 | HRGMv2_2580_8_13 | 14868 | 17165 | + | GH3 |
| TF | HRGMv2_2580_8 | HRGMv2_2580_8_14 | 17266 | 18267 | + | LacI |
| CAZyme | HRGMv2_2580_8 | HRGMv2_2580_8_15 | 18411 | 19808 | + | GH1 |
Gene ID: HRGMv2_2580_8_3
Type: TC
Location: 1431 - 3128 (+)
Type: TC
Location: 1431 - 3128 (+)
Gene ID: HRGMv2_2580_8_4
Type: TC
Location: 3218 - 4183 (+)
Type: TC
Location: 3218 - 4183 (+)
Gene ID: HRGMv2_2580_8_5
Type: TC
Location: 4202 - 5098 (+)
Type: TC
Location: 4202 - 5098 (+)
Gene ID: HRGMv2_2580_8_6
Type: pfam
Location: 5137 - 5745 (+)
Type: pfam
Location: 5137 - 5745 (+)
Gene ID: HRGMv2_2580_8_7
Type: CAZyme
Location: 6012 - 8138 (+)
Type: CAZyme
Location: 6012 - 8138 (+)
Gene ID: HRGMv2_2580_8_8
Type: CAZyme
Location: 8151 - 9251 (+)
Type: CAZyme
Location: 8151 - 9251 (+)
Gene ID: HRGMv2_2580_8_9
Type: pfam
Location: 9346 - 10509 (+)
Type: pfam
Location: 9346 - 10509 (+)
Gene ID: HRGMv2_2580_8_10
Type: peptidase
Location: 10531 - 11430 (+)
Type: peptidase
Location: 10531 - 11430 (+)
Gene ID: HRGMv2_2580_8_11
Type: CAZyme
Location: 11448 - 12986 (+)
Type: CAZyme
Location: 11448 - 12986 (+)
Gene ID: HRGMv2_2580_8_12
Type: TC
Location: 13541 - 14875 (+)
Type: TC
Location: 13541 - 14875 (+)
Gene ID: HRGMv2_2580_8_13
Type: CAZyme
Location: 14868 - 17165 (+)
Type: CAZyme
Location: 14868 - 17165 (+)
Gene ID: HRGMv2_2580_8_14
Type: TF
Location: 17266 - 18267 (+)
Type: TF
Location: 17266 - 18267 (+)
Gene ID: HRGMv2_2580_8_15
Type: CAZyme
Location: 18411 - 19808 (+)
Type: CAZyme
Location: 18411 - 19808 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.