dbCAN Logo

Cluster: HRGMv2_2580_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2580_6 HRGMv2_2580_6_51 57906 58946 + 3.A.16.1.2
TF HRGMv2_2580_6 HRGMv2_2580_6_52 58943 59776 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2580_6 HRGMv2_2580_6_53 59982 62258 + GH36
TC HRGMv2_2580_6 HRGMv2_2580_6_54 62524 63369 - 3.A.1.24.2
TC HRGMv2_2580_6 HRGMv2_2580_6_55 63474 64160 - 3.A.1.24.2
TC HRGMv2_2580_6 HRGMv2_2580_6_56 64153 65187 - 3.A.1.24.2
TC HRGMv2_2580_6 HRGMv2_2580_6_57 65747 67207 - 2.A.17.1.7
pfam HRGMv2_2580_6 HRGMv2_2580_6_58 67867 68205 - Biotin_lipoyl | GCV_H
pfam HRGMv2_2580_6 HRGMv2_2580_6_59 68208 68564 - Glutaredoxin | ArsC
TC HRGMv2_2580_6 HRGMv2_2580_6_60 68605 69804 - 2.A.103.1.3
NULL(UNKNOWN) HRGMv2_2580_6 HRGMv2_2580_6_61 70055 70291 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2580_6 HRGMv2_2580_6_62 70977 71606 - Pribosyltran
TC HRGMv2_2580_6 HRGMv2_2580_6_63 71889 73571 - 3.A.1.147.8
TC HRGMv2_2580_6 HRGMv2_2580_6_64 73564 74328 - 3.A.1.147.8
Gene ID: HRGMv2_2580_6_51
Type: TC
Location: 57906 - 58946 (+)
Gene ID: HRGMv2_2580_6_52
Type: TF
Location: 58943 - 59776 (+)
Gene ID: HRGMv2_2580_6_53
Type: CAZyme
Location: 59982 - 62258 (+)
Gene ID: HRGMv2_2580_6_54
Type: TC
Location: 62524 - 63369 (-)
Gene ID: HRGMv2_2580_6_55
Type: TC
Location: 63474 - 64160 (-)
Gene ID: HRGMv2_2580_6_56
Type: TC
Location: 64153 - 65187 (-)
Gene ID: HRGMv2_2580_6_57
Type: TC
Location: 65747 - 67207 (-)
Gene ID: HRGMv2_2580_6_58
Type: pfam
Location: 67867 - 68205 (-)
Gene ID: HRGMv2_2580_6_59
Type: pfam
Location: 68208 - 68564 (-)
Gene ID: HRGMv2_2580_6_60
Type: TC
Location: 68605 - 69804 (-)
Gene ID: HRGMv2_2580_6_61
Type:
Location: 70055 - 70291 (-)
Gene ID: HRGMv2_2580_6_62
Type: STP
Location: 70977 - 71606 (-)
Gene ID: HRGMv2_2580_6_63
Type: TC
Location: 71889 - 73571 (-)
Gene ID: HRGMv2_2580_6_64
Type: TC
Location: 73564 - 74328 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List