Cluster: HRGMv2_2580_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2580
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2580_5 | HRGMv2_2580_5_113 | 125417 | 128044 | + | 9.B.144.1.5 |
| CAZyme | HRGMv2_2580_5 | HRGMv2_2580_5_114 | 128299 | 130224 | - | GH20 |
| pfam | HRGMv2_2580_5 | HRGMv2_2580_5_115 | 130633 | 131415 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | HRGMv2_2580_5 | HRGMv2_2580_5_116 | 131622 | 132419 | - | 3.A.1.26.7 |
| TC | HRGMv2_2580_5 | HRGMv2_2580_5_117 | 132409 | 133275 | - | 3.A.1.26.7 |
| TC | HRGMv2_2580_5 | HRGMv2_2580_5_118 | 133251 | 134090 | - | 3.A.1.26.7 |
Gene ID: HRGMv2_2580_5_113
Type: TC
Location: 125417 - 128044 (+)
Type: TC
Location: 125417 - 128044 (+)
Gene ID: HRGMv2_2580_5_114
Type: CAZyme
Location: 128299 - 130224 (-)
Type: CAZyme
Location: 128299 - 130224 (-)
Gene ID: HRGMv2_2580_5_115
Type: pfam
Location: 130633 - 131415 (-)
Type: pfam
Location: 130633 - 131415 (-)
Gene ID: HRGMv2_2580_5_116
Type: TC
Location: 131622 - 132419 (-)
Type: TC
Location: 131622 - 132419 (-)
Gene ID: HRGMv2_2580_5_117
Type: TC
Location: 132409 - 133275 (-)
Type: TC
Location: 132409 - 133275 (-)
Gene ID: HRGMv2_2580_5_118
Type: TC
Location: 133251 - 134090 (-)
Type: TC
Location: 133251 - 134090 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.