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Cluster: HRGMv2_2580_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2580_5 HRGMv2_2580_5_95 102668 104764 - GH36
TC HRGMv2_2580_5 HRGMv2_2580_5_96 104769 105614 - 3.A.1.1.41
TC HRGMv2_2580_5 HRGMv2_2580_5_97 105607 106548 - 3.A.1.1.41
TC HRGMv2_2580_5 HRGMv2_2580_5_98 106608 107909 - 3.A.1.1.7
TF HRGMv2_2580_5 HRGMv2_2580_5_99 108069 108950 + HTH_AraC | HTH_AraC
TC HRGMv2_2580_5 HRGMv2_2580_5_100 109328 110263 - 3.A.1.5.19
TC HRGMv2_2580_5 HRGMv2_2580_5_101 110256 111359 - 3.A.1.5.25
TC HRGMv2_2580_5 HRGMv2_2580_5_102 111375 112313 - 3.A.1.5.25
TC HRGMv2_2580_5 HRGMv2_2580_5_103 112315 113805 - 3.A.1.5.10
TC HRGMv2_2580_5 HRGMv2_2580_5_104 114091 116106 - 3.A.1.5.25
TC HRGMv2_2580_5 HRGMv2_2580_5_105 117016 117261 - 3.D.1.6.3
Gene ID: HRGMv2_2580_5_95
Type: CAZyme
Location: 102668 - 104764 (-)
Gene ID: HRGMv2_2580_5_96
Type: TC
Location: 104769 - 105614 (-)
Gene ID: HRGMv2_2580_5_97
Type: TC
Location: 105607 - 106548 (-)
Gene ID: HRGMv2_2580_5_98
Type: TC
Location: 106608 - 107909 (-)
Gene ID: HRGMv2_2580_5_99
Type: TF
Location: 108069 - 108950 (+)
Gene ID: HRGMv2_2580_5_100
Type: TC
Location: 109328 - 110263 (-)
Gene ID: HRGMv2_2580_5_101
Type: TC
Location: 110256 - 111359 (-)
Gene ID: HRGMv2_2580_5_102
Type: TC
Location: 111375 - 112313 (-)
Gene ID: HRGMv2_2580_5_103
Type: TC
Location: 112315 - 113805 (-)
Gene ID: HRGMv2_2580_5_104
Type: TC
Location: 114091 - 116106 (-)
Gene ID: HRGMv2_2580_5_105
Type: TC
Location: 117016 - 117261 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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