Cluster: HRGMv2_2539_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2539
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2539_5 | HRGMv2_2539_5_8 | 4578 | 6503 | - | 4.A.2.1.20 |
| STP | HRGMv2_2539_5 | HRGMv2_2539_5_9 | 6554 | 7468 | - | PfkB |
| TF | HRGMv2_2539_5 | HRGMv2_2539_5_10 | 7465 | 8217 | - | HTH_DeoR |
| CAZyme | HRGMv2_2539_5 | HRGMv2_2539_5_11 | 8382 | 9842 | + | GH13_5 |
| TC | HRGMv2_2539_5 | HRGMv2_2539_5_12 | 9851 | 11425 | - | 2.A.49.5.5 |
Gene ID: HRGMv2_2539_5_8
Type: TC
Location: 4578 - 6503 (-)
Type: TC
Location: 4578 - 6503 (-)
Gene ID: HRGMv2_2539_5_9
Type: STP
Location: 6554 - 7468 (-)
Type: STP
Location: 6554 - 7468 (-)
Gene ID: HRGMv2_2539_5_10
Type: TF
Location: 7465 - 8217 (-)
Type: TF
Location: 7465 - 8217 (-)
Gene ID: HRGMv2_2539_5_11
Type: CAZyme
Location: 8382 - 9842 (+)
Type: CAZyme
Location: 8382 - 9842 (+)
Gene ID: HRGMv2_2539_5_12
Type: TC
Location: 9851 - 11425 (-)
Type: TC
Location: 9851 - 11425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.