Cluster: HRGMv2_2539_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2539
- CGC Family ID: CGCFAM_02701
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2539_4 | HRGMv2_2539_4_3 | 2264 | 4210 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_2539_4 | HRGMv2_2539_4_4 | 4230 | 5852 | + | GH13_29 |
| pfam | HRGMv2_2539_4 | HRGMv2_2539_4_5 | 5929 | 6681 | - | adh_short | KR | adh_short_C2 |
| pfam | HRGMv2_2539_4 | HRGMv2_2539_4_6 | 6678 | 6899 | - | Tad2-like |
| CAZyme | HRGMv2_2539_4 | HRGMv2_2539_4_7 | 7018 | 9402 | - | GT51 |
Gene ID: HRGMv2_2539_4_3
Type: TC
Location: 2264 - 4210 (+)
Type: TC
Location: 2264 - 4210 (+)
Gene ID: HRGMv2_2539_4_4
Type: CAZyme
Location: 4230 - 5852 (+)
Type: CAZyme
Location: 4230 - 5852 (+)
Gene ID: HRGMv2_2539_4_5
Type: pfam
Location: 5929 - 6681 (-)
Type: pfam
Location: 5929 - 6681 (-)
Gene ID: HRGMv2_2539_4_6
Type: pfam
Location: 6678 - 6899 (-)
Type: pfam
Location: 6678 - 6899 (-)
Gene ID: HRGMv2_2539_4_7
Type: CAZyme
Location: 7018 - 9402 (-)
Type: CAZyme
Location: 7018 - 9402 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.