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Cluster: HRGMv2_2539_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2539_3 HRGMv2_2539_3_106 107356 109485 - GH73
TF HRGMv2_2539_3 HRGMv2_2539_3_107 109998 110426 + MarR
TC HRGMv2_2539_3 HRGMv2_2539_3_108 110465 112189 + 3.A.1.135.7
TC HRGMv2_2539_3 HRGMv2_2539_3_109 112176 113927 + 3.A.1.135.5
pfam HRGMv2_2539_3 HRGMv2_2539_3_110 113978 114682 - Ribul_P_3_epim
TC HRGMv2_2539_3 HRGMv2_2539_3_111 114699 115799 - 4.A.2.1.22
TC HRGMv2_2539_3 HRGMv2_2539_3_112 115818 116267 - 4.A.2.1.22
TC HRGMv2_2539_3 HRGMv2_2539_3_113 116315 116632 - 4.A.2.1.22
Gene ID: HRGMv2_2539_3_106
Type: CAZyme
Location: 107356 - 109485 (-)
Gene ID: HRGMv2_2539_3_107
Type: TF
Location: 109998 - 110426 (+)
Gene ID: HRGMv2_2539_3_108
Type: TC
Location: 110465 - 112189 (+)
Gene ID: HRGMv2_2539_3_109
Type: TC
Location: 112176 - 113927 (+)
Gene ID: HRGMv2_2539_3_110
Type: pfam
Location: 113978 - 114682 (-)
Gene ID: HRGMv2_2539_3_111
Type: TC
Location: 114699 - 115799 (-)
Gene ID: HRGMv2_2539_3_112
Type: TC
Location: 115818 - 116267 (-)
Gene ID: HRGMv2_2539_3_113
Type: TC
Location: 116315 - 116632 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Enterococcaceae
→
Genus
Enterococcus_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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