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Cluster: HRGMv2_2539_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2539_27 HRGMv2_2539_27_9 7658 8992 - 2.A.3.1.22
pfam HRGMv2_2539_27 HRGMv2_2539_27_10 9407 9649 + Transgly_assoc
pfam HRGMv2_2539_27 HRGMv2_2539_27_11 9688 10629 - NAD_Gly3P_dh_N | ApbA | 3HCDH_N | NAD_binding_2 | ApbA_C
CAZyme HRGMv2_2539_27 HRGMv2_2539_27_12 10821 11879 + GH170
STP HRGMv2_2539_27 HRGMv2_2539_27_13 11872 12762 + SIS
TC HRGMv2_2539_27 HRGMv2_2539_27_14 12832 14781 + 4.A.1.2.11
TF HRGMv2_2539_27 HRGMv2_2539_27_15 14823 15674 - HTH_6
TC HRGMv2_2539_27 HRGMv2_2539_27_16 15821 16456 + 9.B.27.2.3
Gene ID: HRGMv2_2539_27_9
Type: TC
Location: 7658 - 8992 (-)
Gene ID: HRGMv2_2539_27_10
Type: pfam
Location: 9407 - 9649 (+)
Gene ID: HRGMv2_2539_27_11
Type: pfam
Location: 9688 - 10629 (-)
Gene ID: HRGMv2_2539_27_12
Type: CAZyme
Location: 10821 - 11879 (+)
Gene ID: HRGMv2_2539_27_13
Type: STP
Location: 11872 - 12762 (+)
Gene ID: HRGMv2_2539_27_14
Type: TC
Location: 12832 - 14781 (+)
Gene ID: HRGMv2_2539_27_15
Type: TF
Location: 14823 - 15674 (-)
Gene ID: HRGMv2_2539_27_16
Type: TC
Location: 15821 - 16456 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Enterococcaceae
→
Genus
Enterococcus_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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