Cluster: HRGMv2_2539_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2539
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2539_24 | HRGMv2_2539_24_7 | 4866 | 6104 | - | GT4 |
| CAZyme | HRGMv2_2539_24 | HRGMv2_2539_24_8 | 6120 | 7163 | - | GT4 |
| TC | HRGMv2_2539_24 | HRGMv2_2539_24_9 | 7313 | 9040 | - | 8.A.7.1.1 |
| STP | HRGMv2_2539_24 | HRGMv2_2539_24_10 | 9040 | 9306 | - | PTS-HPr |
| TC | HRGMv2_2539_24 | HRGMv2_2539_24_11 | 9741 | 11954 | + | 3.A.9.1.2 |
Gene ID: HRGMv2_2539_24_7
Type: CAZyme
Location: 4866 - 6104 (-)
Type: CAZyme
Location: 4866 - 6104 (-)
Gene ID: HRGMv2_2539_24_8
Type: CAZyme
Location: 6120 - 7163 (-)
Type: CAZyme
Location: 6120 - 7163 (-)
Gene ID: HRGMv2_2539_24_9
Type: TC
Location: 7313 - 9040 (-)
Type: TC
Location: 7313 - 9040 (-)
Gene ID: HRGMv2_2539_24_10
Type: STP
Location: 9040 - 9306 (-)
Type: STP
Location: 9040 - 9306 (-)
Gene ID: HRGMv2_2539_24_11
Type: TC
Location: 9741 - 11954 (+)
Type: TC
Location: 9741 - 11954 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.