Cluster: HRGMv2_2539_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2539
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2539_22 | HRGMv2_2539_22_13 | 7882 | 8562 | - | GT2 |
| TC | HRGMv2_2539_22 | HRGMv2_2539_22_14 | 8559 | 9551 | - | 3.A.1.20.2 |
| pfam | HRGMv2_2539_22 | HRGMv2_2539_22_15 | 9532 | 10329 | - | BPD_transp_1 |
| pfam | HRGMv2_2539_22 | HRGMv2_2539_22_16 | 10326 | 11180 | - | BPD_transp_1 |
| TC | HRGMv2_2539_22 | HRGMv2_2539_22_17 | 11173 | 12420 | - | 3.A.1.19.4 |
Gene ID: HRGMv2_2539_22_13
Type: CAZyme
Location: 7882 - 8562 (-)
Type: CAZyme
Location: 7882 - 8562 (-)
Gene ID: HRGMv2_2539_22_14
Type: TC
Location: 8559 - 9551 (-)
Type: TC
Location: 8559 - 9551 (-)
Gene ID: HRGMv2_2539_22_15
Type: pfam
Location: 9532 - 10329 (-)
Type: pfam
Location: 9532 - 10329 (-)
Gene ID: HRGMv2_2539_22_16
Type: pfam
Location: 10326 - 11180 (-)
Type: pfam
Location: 10326 - 11180 (-)
Gene ID: HRGMv2_2539_22_17
Type: TC
Location: 11173 - 12420 (-)
Type: TC
Location: 11173 - 12420 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.