Cluster: HRGMv2_2539_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2539
- CGC Family ID: CGCFAM_00057
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2539_7 | HRGMv2_2539_7_64 | 56603 | 58432 | + | 1.A.33.1.4 |
| pfam | HRGMv2_2539_7 | HRGMv2_2539_7_65 | 58580 | 59740 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | HRGMv2_2539_7 | HRGMv2_2539_7_66 | 59779 | 62358 | - | 2.A.1.3.35 |
| peptidase | HRGMv2_2539_7 | HRGMv2_2539_7_67 | 62363 | 63082 | - | S33.UPW |
| CAZyme | HRGMv2_2539_7 | HRGMv2_2539_7_68 | 63270 | 63905 | + | GH23 |
Gene ID: HRGMv2_2539_7_64
Type: TC
Location: 56603 - 58432 (+)
Type: TC
Location: 56603 - 58432 (+)
Gene ID: HRGMv2_2539_7_65
Type: pfam
Location: 58580 - 59740 (+)
Type: pfam
Location: 58580 - 59740 (+)
Gene ID: HRGMv2_2539_7_66
Type: TC
Location: 59779 - 62358 (-)
Type: TC
Location: 59779 - 62358 (-)
Gene ID: HRGMv2_2539_7_67
Type: peptidase
Location: 62363 - 63082 (-)
Type: peptidase
Location: 62363 - 63082 (-)
Gene ID: HRGMv2_2539_7_68
Type: CAZyme
Location: 63270 - 63905 (+)
Type: CAZyme
Location: 63270 - 63905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.