Cluster: HRGMv2_2539_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2539
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2539_5 | HRGMv2_2539_5_45 | 46450 | 49053 | + | 3.A.9.1.2 |
| CAZyme | HRGMv2_2539_5 | HRGMv2_2539_5_46 | 49314 | 50180 | + | GH73 |
| STP | HRGMv2_2539_5 | HRGMv2_2539_5_47 | 50371 | 51300 | + | PALP |
| TF | HRGMv2_2539_5 | HRGMv2_2539_5_48 | 51394 | 51831 | + | FUR |
| TC | HRGMv2_2539_5 | HRGMv2_2539_5_49 | 52260 | 53369 | + | 3.D.2.2.1 |
Gene ID: HRGMv2_2539_5_45
Type: TC
Location: 46450 - 49053 (+)
Type: TC
Location: 46450 - 49053 (+)
Gene ID: HRGMv2_2539_5_46
Type: CAZyme
Location: 49314 - 50180 (+)
Type: CAZyme
Location: 49314 - 50180 (+)
Gene ID: HRGMv2_2539_5_47
Type: STP
Location: 50371 - 51300 (+)
Type: STP
Location: 50371 - 51300 (+)
Gene ID: HRGMv2_2539_5_48
Type: TF
Location: 51394 - 51831 (+)
Type: TF
Location: 51394 - 51831 (+)
Gene ID: HRGMv2_2539_5_49
Type: TC
Location: 52260 - 53369 (+)
Type: TC
Location: 52260 - 53369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.