Cluster: HRGMv2_2539_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: HRGMv2_2539
- CGC Family ID: CGCFAM_00066
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2539_1 | HRGMv2_2539_1_144 | 160933 | 162288 | + | 4.A.3.2.8 |
| CAZyme | HRGMv2_2539_1 | HRGMv2_2539_1_145 | 162313 | 163743 | + | GH1 |
| TC | HRGMv2_2539_1 | HRGMv2_2539_1_146 | 163776 | 164102 | + | 4.A.3.2.4 |
| TC | HRGMv2_2539_1 | HRGMv2_2539_1_147 | 164131 | 164445 | + | 4.A.3.2.8 |
Gene ID: HRGMv2_2539_1_144
Type: TC
Location: 160933 - 162288 (+)
Type: TC
Location: 160933 - 162288 (+)
Gene ID: HRGMv2_2539_1_145
Type: CAZyme
Location: 162313 - 163743 (+)
Type: CAZyme
Location: 162313 - 163743 (+)
Gene ID: HRGMv2_2539_1_146
Type: TC
Location: 163776 - 164102 (+)
Type: TC
Location: 163776 - 164102 (+)
Gene ID: HRGMv2_2539_1_147
Type: TC
Location: 164131 - 164445 (+)
Type: TC
Location: 164131 - 164445 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.