Cluster: HRGMv2_2531_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2531
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2531_13 | HRGMv2_2531_13_2 | 988 | 1884 | - | 2.A.7.3.31 |
| peptidase | HRGMv2_2531_13 | HRGMv2_2531_13_3 | 1893 | 2828 | - | S12.950 |
| pfam | HRGMv2_2531_13 | HRGMv2_2531_13_4 | 2825 | 3550 | - | CppA_N | CppA_C |
| TC | HRGMv2_2531_13 | HRGMv2_2531_13_5 | 3674 | 4543 | - | 1.A.8.2.2 |
| pfam | HRGMv2_2531_13 | HRGMv2_2531_13_6 | 4699 | 5865 | - | CPSase_L_D2 | ATP-grasp_4 |
| peptidase | HRGMv2_2531_13 | HRGMv2_2531_13_7 | 5878 | 6618 | - | S09.UPW |
| CAZyme | HRGMv2_2531_13 | HRGMv2_2531_13_8 | 6639 | 7463 | - | CE1 |
Gene ID: HRGMv2_2531_13_2
Type: TC
Location: 988 - 1884 (-)
Type: TC
Location: 988 - 1884 (-)
Gene ID: HRGMv2_2531_13_3
Type: peptidase
Location: 1893 - 2828 (-)
Type: peptidase
Location: 1893 - 2828 (-)
Gene ID: HRGMv2_2531_13_4
Type: pfam
Location: 2825 - 3550 (-)
Type: pfam
Location: 2825 - 3550 (-)
Gene ID: HRGMv2_2531_13_5
Type: TC
Location: 3674 - 4543 (-)
Type: TC
Location: 3674 - 4543 (-)
Gene ID: HRGMv2_2531_13_6
Type: pfam
Location: 4699 - 5865 (-)
Type: pfam
Location: 4699 - 5865 (-)
Gene ID: HRGMv2_2531_13_7
Type: peptidase
Location: 5878 - 6618 (-)
Type: peptidase
Location: 5878 - 6618 (-)
Gene ID: HRGMv2_2531_13_8
Type: CAZyme
Location: 6639 - 7463 (-)
Type: CAZyme
Location: 6639 - 7463 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus chosunense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.